Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | DU508_09065 | Not Available | Positive | 2113514 - 2113825 | 12212.0 |
| hypothetical protein | DU508_09070 | Not Available | Positive | 2113927 - 2114127 | 7364.8 |
| cpbp family intramembrane metalloprotease | DU508_09075 | Not Available | Positive | 2114363 - 2114821 | 18316.1 |
| cpbp family intramembrane metalloprotease | DU508_09080 | Not Available | Positive | 2114850 - 2115716 | 33667.9 |
| hypothetical protein | DU508_09085 | Not Available | Positive | 2115852 - 2116340 | 18696.4 |
| udp-n-acetylmuramate dehydrogenase | DU508_09090 | Not Available | Positive | 2116421 - 2117437 | 37141.2 |
| rna polymerase sigma factor | DU508_09095 | Not Available | Positive | 2117571 - 2118101 | 20431.5 |
| phytoene desaturase | DU508_09100 | Not Available | Negative | 2118945 - 2120426 | 56323.6 |
| hypothetical protein | DU508_09105 | Not Available | Positive | 2120746 - 2121276 | 20670.5 |
| lycopene cyclase domain-containing protein | DU508_09110 | Not Available | Positive | 2121277 - 2121957 | 26843.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

