Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | DU508_08910 | Not Available | Negative | 2078355 - 2079971 | 60808.7 |
| hypothetical protein | DU508_08915 | Not Available | Negative | 2080104 - 2080751 | 24431.3 |
| nucleotidyltransferase domain-containing protein | DU508_08925 | Not Available | Negative | 2081095 - 2081397 | 11633.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DU508_08930 | Not Available | Negative | 2081419 - 2082132 | 26612.2 |
| serine--trna ligase | DU508_08935 | Not Available | Positive | 2082248 - 2083519 | 47650.9 |
| hypothetical protein | DU508_08940 | Not Available | Negative | 2083673 - 2083987 | 11557.4 |
| duf541 domain-containing protein | DU508_08945 | Not Available | Negative | 2084085 - 2084771 | 25179.6 |
| cold shock domain-containing protein | DU508_08950 | Not Available | Negative | 2085256 - 2085708 | 16871.1 |
| n-acetyltransferase | DU508_08955 | Not Available | Negative | 2085901 - 2086437 | 20605.5 |
| trans-2-enoyl-coa reductase family protein | DU508_08960 | Not Available | Negative | 2086583 - 2087776 | 43131.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

