Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | DU508_08860 | Not Available | Positive | 2069492 - 2070571 | 39436.9 |
| 2-phosphosulfolactate phosphatase | DU508_08865 | Not Available | Positive | 2070648 - 2071373 | 26646.1 |
| patatin | DU508_08870 | Not Available | Negative | 2071453 - 2072226 | 27935.6 |
| gliding motility lipoprotein gldb | DU508_08875 | Not Available | Negative | 2072305 - 2073339 | 40151.1 |
| port family protein | DU508_08880 | Not Available | Positive | 2073499 - 2074179 | 24632.4 |
| nad+ synthase | DU508_08885 | Not Available | Positive | 2074195 - 2075835 | 61293.0 |
| luxr family transcriptional regulator | DU508_08890 | Not Available | Positive | 2075915 - 2076604 | 26397.5 |
| osmc family peroxiredoxin | DU508_08895 | Not Available | Negative | 2076729 - 2077145 | 14735.3 |
| signal peptidase ii | DU508_08900 | Not Available | Negative | 2077367 - 2077885 | 19691.7 |
| damage-inducible protein dinb | DU508_08905 | Not Available | Negative | 2077891 - 2078352 | 18096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

