Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4271 domain-containing protein | DU508_08710 | Not Available | Positive | 2037746 - 2038723 | 37371.8 |
| uroporphyrinogen-iii synthase | DU508_08715 | Not Available | Positive | 2038737 - 2039507 | 29395.3 |
| gliding motility-associated lipoprotein | DU508_08720 | Not Available | Positive | 2039732 - 2041057 | 49552.2 |
| gliding motility protein gldl | DU508_08725 | Not Available | Positive | 2041100 - 2041906 | 28691.0 |
| gliding motility protein gldm | DU508_08730 | Not Available | Positive | 2041950 - 2043485 | 54868.2 |
| gliding motility protein gldn | DU508_08735 | Not Available | Positive | 2043475 - 2044404 | 35378.4 |
| excinuclease abc subunit c | DU508_08740 | Not Available | Negative | 2044555 - 2046357 | 69547.2 |
| hypothetical protein | DU508_08745 | Not Available | Negative | 2046387 - 2046644 | 9763.03 |
| hypothetical protein | DU508_08750 | Not Available | Negative | 2046647 - 2046877 | 8964.99 |
| penicillin-binding protein | DU508_08755 | Not Available | Negative | 2046958 - 2049177 | 83138.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

