Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | DU508_08660 | Not Available | Positive | 2027363 - 2028313 | 35619.7 |
| nuclear transport factor 2 family protein | DU508_08665 | Not Available | Positive | 2028417 - 2028842 | 16119.6 |
| hypothetical protein | DU508_08670 | Not Available | Negative | 2028839 - 2030110 | 48120.4 |
| sugar o-acetyltransferase | DU508_08675 | Not Available | Negative | 2030193 - 2030807 | 23042.6 |
| cupin-like domain-containing protein | DU508_08680 | Not Available | Negative | 2031623 - 2032501 | 33892.1 |
| duf3050 domain-containing protein | DU508_08685 | Not Available | Negative | 2032666 - 2033457 | 30135.8 |
| cupin-like domain-containing protein | DU508_08690 | Not Available | Negative | 2033552 - 2034433 | 34596.7 |
| fasciclin domain-containing protein | DU508_08695 | Not Available | Negative | 2034746 - 2035297 | 19268.7 |
| short chain dehydrogenase | DU508_08700 | Not Available | Negative | 2035658 - 2036440 | 28228.1 |
| coproporphyrinogen iii oxidase family protein | DU508_08705 | Not Available | Negative | 2036520 - 2037647 | 42566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

