Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor (bi)-1/ycca family protein | DU508_08605 | Not Available | Positive | 2010325 - 2011080 | 27579.6 |
| methionine synthase | DU508_08610 | Not Available | Positive | 2011518 - 2015714 | 155684.0 |
| methylenetetrahydrofolate reductase | DU508_08615 | Not Available | Positive | 2015844 - 2016797 | 36002.5 |
| hypothetical protein | DU508_08620 | Not Available | Positive | 2016996 - 2017298 | 11419.7 |
| tail fiber domain-containing protein | DU508_08625 | Not Available | Positive | 2017461 - 2017880 | 15372.5 |
| hypothetical protein | DU508_08630 | Not Available | Positive | 2018542 - 2020065 | 58446.3 |
| threonine synthase | DU508_08640 | Not Available | Negative | 2020886 - 2022193 | 48289.5 |
| homoserine kinase | DU508_08645 | Not Available | Negative | 2022276 - 2023238 | 34127.5 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DU508_08650 | Not Available | Negative | 2023373 - 2025823 | 89195.8 |
| ribosome small subunit-dependent gtpase a | DU508_08655 | Not Available | Positive | 2026331 - 2027251 | 34151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

