Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2000797 - 2000868 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2000943 - 2001018 | Not Available |
| gtpase era | DU508_08560 | Not Available | Positive | 2001133 - 2002029 | 33888.0 |
| ribosome biogenesis gtpase der | DU508_08565 | Not Available | Positive | 2002249 - 2003550 | 49036.3 |
| hypothetical protein | DU508_08570 | Not Available | Negative | 2004568 - 2004813 | 9668.14 |
| gnat family n-acetyltransferase | DU508_08575 | Not Available | Positive | 2005035 - 2005544 | 19682.4 |
| n-acetyltransferase | DU508_08585 | Not Available | Negative | 2006393 - 2006899 | 19325.1 |
| s41 family peptidase | DU508_08590 | Not Available | Negative | 2007055 - 2008662 | 59032.6 |
| n-acetylmuramic acid 6-phosphate etherase | DU508_08595 | Not Available | Positive | 2008853 - 2009668 | 29260.9 |
| hypothetical protein | DU508_08600 | Not Available | Positive | 2009722 - 2010288 | 22916.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

