Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | DU508_00780 | Not Available | Positive | 183412 - 186171 | 102746.0 |
| glycosylase | DU508_00785 | Not Available | Positive | 186164 - 187276 | 42810.8 |
| duf4982 domain-containing protein | DU508_00790 | Not Available | Positive | 187440 - 189788 | 87951.6 |
| duf4981 domain-containing protein | DU508_00795 | Not Available | Positive | 189851 - 193240 | 127571.0 |
| extracellular solute-binding protein | DU508_00800 | Not Available | Positive | 193371 - 194531 | 43447.7 |
| coa transferase | DU508_00805 | Not Available | Positive | 194528 - 195688 | 42524.3 |
| coa transferase | DU508_00810 | Not Available | Positive | 195943 - 197106 | 42867.6 |
| extracellular solute-binding protein | DU508_00815 | Not Available | Positive | 197099 - 198337 | 46649.5 |
| gfo/idh/moca family oxidoreductase | DU508_00820 | Not Available | Positive | 198334 - 199437 | 40919.4 |
| dehydratase | DU508_00825 | Not Available | Positive | 199841 - 200284 | 16755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

