Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | DU508_08440 | Not Available | Positive | 1975569 - 1976744 | 43745.1 |
| susc/raga family tonb-linked outer membrane protein | DU508_08445 | Not Available | Positive | 1976893 - 1980312 | 124745.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_08450 | Not Available | Positive | 1980390 - 1981898 | 55471.0 |
| pkd domain-containing protein | DU508_08455 | Not Available | Positive | 1981910 - 1983313 | 50634.4 |
| glycoside hydrolase family 16 protein | DU508_08460 | Not Available | Positive | 1983374 - 1984258 | 33296.2 |
| class a beta-lactamase-related serine hydrolase | DU508_08470 | Not Available | Positive | 1985224 - 1986324 | 40141.7 |
| transcriptional regulator | DU508_08475 | Not Available | Negative | 1986408 - 1986797 | 14794.9 |
| doxx family protein | DU508_08480 | Not Available | Positive | 1986898 - 1987284 | 14264.7 |
| hypothetical protein | DU508_08485 | Not Available | Negative | 1987440 - 1989731 | 80524.0 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DU508_08490 | Not Available | Positive | 1989941 - 1990354 | 15393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

