Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | DU508_08390 | Not Available | Positive | 1962855 - 1966364 | 124901.0 |
| type ix secretion system membrane protein porp/sprf | DU508_08395 | Not Available | Negative | 1966361 - 1967371 | 36818.4 |
| osmc family peroxiredoxin | DU508_08400 | Not Available | Positive | 1967568 - 1968044 | 17570.6 |
| m1 family peptidase | DU508_08405 | Not Available | Negative | 1968279 - 1970159 | 70923.1 |
| transcription elongation factor grea | DU508_08410 | Not Available | Positive | 1970460 - 1970933 | 17154.6 |
| hit family protein | DU508_08415 | Not Available | Positive | 1971018 - 1971416 | 14705.1 |
| pirin family protein | DU508_08420 | Not Available | Negative | 1971431 - 1972321 | 33720.5 |
| 12-oxophytodienoate reductase | DU508_08425 | Not Available | Negative | 1973094 - 1974194 | 40096.5 |
| transcriptional regulator | DU508_08430 | Not Available | Negative | 1974208 - 1974510 | 11403.7 |
| rna polymerase sigma-70 factor | DU508_08435 | Not Available | Positive | 1974684 - 1975262 | 22898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

