Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DU508_08335 | Not Available | Negative | 1949403 - 1950200 | 29992.6 |
| atp-binding cassette domain-containing protein | DU508_08340 | Not Available | Negative | 1950202 - 1951110 | 33111.5 |
| hypothetical protein | DU508_08345 | Not Available | Negative | 1951115 - 1951369 | 9193.58 |
| hypothetical protein | DU508_08350 | Not Available | Positive | 1951624 - 1952658 | 39773.0 |
| dna-binding response regulator | DU508_08355 | Not Available | Positive | 1952718 - 1953467 | 28539.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DU508_08360 | Not Available | Negative | 1953541 - 1954287 | 28119.8 |
| nudix hydrolase | DU508_08370 | Not Available | Negative | 1955969 - 1956523 | 21081.2 |
| tonb-dependent receptor | DU508_08375 | Not Available | Negative | 1956559 - 1958982 | 89628.1 |
| tonb-dependent receptor | DU508_08380 | Not Available | Negative | 1959043 - 1961535 | 91919.8 |
| phosphoglycerate dehydrogenase | DU508_08385 | Not Available | Positive | 1961797 - 1962747 | 35758.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

