Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfa family protein | DU508_08230 | Not Available | Positive | 1930573 - 1930905 | 12195.3 |
| diaminopimelate epimerase | DU508_08235 | Not Available | Negative | 1930967 - 1931749 | 28950.3 |
| pdz domain-containing protein | DU508_08240 | Not Available | Positive | 1932118 - 1933680 | 54535.0 |
| four-helix bundle copper-binding protein | DU508_08245 | Not Available | Negative | 1933742 - 1934086 | 12875.4 |
| cold-shock protein | DU508_08250 | Not Available | Positive | 1934382 - 1934573 | 6904.04 |
| gxxexxy protein | DU508_08255 | Not Available | Negative | 1934627 - 1935052 | 16449.3 |
| succinate dehydrogenase | DU508_08260 | Not Available | Positive | 1935868 - 1936548 | 25403.6 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DU508_08265 | Not Available | Positive | 1936568 - 1938547 | 73188.7 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DU508_08270 | Not Available | Positive | 1938659 - 1939429 | 27847.4 |
| tonb family protein | DU508_08280 | Not Available | Negative | 1939926 - 1940489 | 20942.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

