Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | DU508_08130 | Not Available | Negative | 1909955 - 1912093 | 79685.7 |
| hypothetical protein | DU508_08135 | Not Available | Negative | 1913287 - 1913505 | 8570.09 |
| hypothetical protein | DU508_08140 | Not Available | Negative | 1913486 - 1914385 | 32842.5 |
| Trna-ser | Not Available | Not Available | Positive | 1914790 - 1914877 | Not Available |
| pyruvate kinase | DU508_08150 | Not Available | Negative | 1914965 - 1916395 | 52353.4 |
| ipexxxvdy family protein | DU508_08155 | Not Available | Negative | 1916547 - 1916966 | 16319.8 |
| acyl carrier protein | DU508_08160 | Not Available | Positive | 1917125 - 1917361 | 8460.92 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DU508_08165 | Not Available | Positive | 1917383 - 1918636 | 44437.7 |
| ribonuclease iii | DU508_08170 | Not Available | Positive | 1918733 - 1919461 | 27631.7 |
| hypothetical protein | DU508_08175 | Not Available | Negative | 1919657 - 1920367 | 27063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

