Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2892 domain-containing protein | DU508_08030 | Not Available | Negative | 1887289 - 1887600 | 11346.6 |
| atp-dependent helicase | DU508_08035 | Not Available | Negative | 1887694 - 1890585 | 111627.0 |
| pyruvate dehydrogenase complex e1 component subunit beta | DU508_08040 | Not Available | Negative | 1891097 - 1892083 | 35971.7 |
| voc family protein | DU508_08045 | Not Available | Negative | 1892279 - 1892635 | 13661.2 |
| hypothetical protein | DU508_08050 | Not Available | Negative | 1892638 - 1892847 | 8198.73 |
| n-acetyltransferase | DU508_08055 | Not Available | Negative | 1892876 - 1893433 | 21747.0 |
| pd-(d/e)xk nuclease family protein | DU508_08060 | Not Available | Negative | 1893635 - 1896499 | 109787.0 |
| dna adenine methylase | DU508_08065 | Not Available | Negative | 1896536 - 1897636 | 43637.6 |
| dna (cytosine-5-)-methyltransferase | DU508_08070 | Not Available | Negative | 1897629 - 1898627 | 37430.0 |
| dna helicase uvrd | DU508_08075 | Not Available | Negative | 1898818 - 1902036 | 122627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

