Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DU508_07930 | Not Available | Positive | 1870304 - 1871515 | 45790.7 |
| elongation factor ts | DU508_07935 | Not Available | Negative | 1871855 - 1872694 | 30032.0 |
| 30s ribosomal protein s2 | DU508_07940 | Not Available | Negative | 1872801 - 1873637 | 31030.7 |
| 30s ribosomal protein s9 | DU508_07945 | Not Available | Negative | 1873656 - 1874042 | 14145.4 |
| 50s ribosomal protein l13 | DU508_07950 | Not Available | Negative | 1874046 - 1874489 | 16387.1 |
| hypothetical protein | DU508_07955 | Not Available | Negative | 1874816 - 1875652 | 31148.7 |
| orf6n domain-containing protein | DU508_07960 | Not Available | Negative | 1875700 - 1876233 | 20953.5 |
| gtpase hflx | DU508_07965 | Not Available | Positive | 1876393 - 1877583 | 45184.6 |
| 30s ribosome-binding factor rbfa | DU508_07970 | Not Available | Positive | 1877666 - 1878043 | 14411.2 |
| hypothetical protein | DU508_07975 | Not Available | Positive | 1877985 - 1878680 | 26788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

