Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | DU508_07880 | Not Available | Positive | 1857041 - 1857421 | 13831.2 |
| glycine cleavage system protein h | DU508_07885 | Not Available | Positive | 1857433 - 1857834 | 15653.4 |
| hypothetical protein | DU508_07890 | Not Available | Positive | 1858091 - 1860910 | 103352.0 |
| tonb-dependent receptor | DU508_07895 | Not Available | Positive | 1861065 - 1863836 | 102488.0 |
| ferrous iron transport protein a | DU508_07900 | Not Available | Positive | 1864034 - 1864249 | 7794.77 |
| ferrous iron transport protein b | DU508_07905 | Not Available | Positive | 1864260 - 1866368 | 78023.8 |
| winged helix-turn-helix transcriptional regulator | DU508_07910 | Not Available | Negative | 1866649 - 1867125 | 17898.9 |
| ribosome recycling factor | DU508_07915 | Not Available | Negative | 1867754 - 1868317 | 20651.0 |
| ump kinase | DU508_07920 | Not Available | Negative | 1868356 - 1869060 | 25880.8 |
| n-acetylglucosamine-6-phosphate deacetylase | DU508_07925 | Not Available | Negative | 1869125 - 1870222 | 39937.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

