Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase tata/tate family subunit | DU508_07830 | Not Available | Positive | 1837375 - 1837740 | 13476.0 |
| twin-arginine translocase tata/tate family subunit | DU508_07835 | Not Available | Positive | 1837776 - 1837952 | 6222.76 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | DU508_07840 | Not Available | Positive | 1837970 - 1839391 | 51365.1 |
| lysm peptidoglycan-binding domain-containing protein | DU508_07845 | Not Available | Positive | 1839584 - 1840987 | 52947.1 |
| hypothetical protein | DU508_07850 | Not Available | Positive | 1841085 - 1841591 | 19877.2 |
| phospholipase c, phosphocholine-specific | DU508_07855 | Not Available | Positive | 1842229 - 1844757 | 95094.6 |
| nadp-dependent malic enzyme | DU508_07860 | Not Available | Positive | 1845352 - 1847670 | 84616.8 |
| holliday junction branch migration protein ruva | DU508_07865 | Not Available | Positive | 1847677 - 1848261 | 21288.0 |
| cell surface protein spra | DU508_07870 | Not Available | Positive | 1848273 - 1855457 | 270368.0 |
| lytr family transcriptional regulator | DU508_07875 | Not Available | Negative | 1855487 - 1856368 | 32921.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

