Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_07725 | Not Available | Positive | 1815319 - 1815891 | 20999.1 |
| peptidylprolyl isomerase | DU508_07730 | Not Available | Positive | 1816119 - 1818206 | 75670.4 |
| duf2480 family protein | DU508_07735 | Not Available | Positive | 1818271 - 1818786 | 19360.5 |
| duf3108 domain-containing protein | DU508_07740 | Not Available | Positive | 1818881 - 1819654 | 29536.6 |
| duf3109 family protein | DU508_07745 | Not Available | Positive | 1819657 - 1820220 | 21427.7 |
| yafy family transcriptional regulator | DU508_07750 | Not Available | Negative | 1820732 - 1821421 | 26823.7 |
| response regulator | DU508_07755 | Not Available | Positive | 1821704 - 1824184 | 94008.9 |
| sigma-54-dependent fis family transcriptional regulator | DU508_07760 | Not Available | Negative | 1824749 - 1826080 | 49445.7 |
| hypothetical protein | DU508_07765 | Not Available | Negative | 1826150 - 1826464 | 11231.4 |
| hypothetical protein | DU508_07770 | Not Available | Negative | 1826583 - 1826897 | 11279.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

