Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01777 family protein | DU508_07675 | Not Available | Negative | 1803556 - 1804482 | 34347.8 |
| duf393 domain-containing protein | DU508_07680 | Not Available | Negative | 1804488 - 1805303 | 31475.4 |
| transcriptional regulator | DU508_07685 | Not Available | Negative | 1805393 - 1805899 | 19095.1 |
| alginate lyase | DU508_07690 | Not Available | Negative | 1805967 - 1807055 | 42132.4 |
| hypothetical protein | DU508_07695 | Not Available | Positive | 1807185 - 1809680 | 93057.9 |
| udp-2,3-diacylglucosamine diphosphatase | DU508_07700 | Not Available | Positive | 1810162 - 1811016 | 33056.8 |
| glycosyl transferase | DU508_07705 | Not Available | Positive | 1811037 - 1812026 | 38004.1 |
| beta-carotene 15,15'-monooxygenase | DU508_07710 | Not Available | Positive | 1812179 - 1813159 | 38162.9 |
| type iii pantothenate kinase | DU508_07715 | Not Available | Positive | 1813291 - 1814025 | 26805.5 |
| hypothetical protein | DU508_07720 | Not Available | Positive | 1814006 - 1815319 | 48287.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

