Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DU508_07570 | Not Available | Negative | 1781669 - 1783117 | 54183.1 |
| glycosyltransferase | DU508_07575 | Not Available | Negative | 1783244 - 1784146 | 34837.7 |
| class i sam-dependent methyltransferase | DU508_07580 | Not Available | Negative | 1784319 - 1785080 | 29394.5 |
| fkbm family methyltransferase | DU508_07585 | Not Available | Negative | 1785091 - 1785738 | 24473.1 |
| flippase | DU508_07590 | Not Available | Negative | 1785735 - 1787054 | 48773.4 |
| hypothetical protein | DU508_07595 | Not Available | Negative | 1787126 - 1787644 | 19961.6 |
| noncanonical pyrimidine nucleotidase, yjjg family | DU508_07600 | Not Available | Negative | 1787751 - 1788440 | 26539.4 |
| uracil phosphoribosyltransferase | DU508_07610 | Not Available | Negative | 1788820 - 1789464 | 23729.1 |
| duf2961 domain-containing protein | DU508_07615 | Not Available | Positive | 1789681 - 1791612 | 72476.4 |
| hypothetical protein | DU508_07620 | Not Available | Negative | 1791617 - 1792885 | 49103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

