Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase | DU508_00685 | Not Available | Positive | 150455 - 152110 | 60725.0 |
| polysaccharide lyase | DU508_00690 | Not Available | Positive | 152112 - 153743 | 59863.2 |
| pectate lyase | DU508_00695 | Not Available | Positive | 154100 - 157252 | 116835.0 |
| duf4038 domain-containing protein | DU508_00700 | Not Available | Positive | 157255 - 158655 | 53317.1 |
| arabinosidase | DU508_00705 | Not Available | Positive | 158779 - 159687 | 34646.2 |
| six-hairpin glycosidase | DU508_00710 | Not Available | Positive | 159743 - 161572 | 68925.6 |
| sialate o-acetylesterase | DU508_00715 | Not Available | Positive | 161732 - 163066 | 50504.2 |
| glycoside hydrolase family 2 | DU508_00720 | Not Available | Positive | 163066 - 165879 | 106793.0 |
| alpha-rhamnosidase | DU508_00725 | Not Available | Positive | 165991 - 168711 | 103640.0 |
| duf3826 domain-containing protein | DU508_00730 | Not Available | Positive | 168926 - 169591 | 24742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

