Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | DU508_07410 | Not Available | Positive | 1749637 - 1751061 | 52896.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DU508_07415 | Not Available | Positive | 1751070 - 1751774 | 26903.4 |
| duf4159 domain-containing protein | DU508_07420 | Not Available | Positive | 1751822 - 1752481 | 24959.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DU508_07425 | Not Available | Positive | 1752484 - 1752984 | 18641.6 |
| gliding motility lipoprotein gldj | DU508_07430 | Not Available | Negative | 1753050 - 1754723 | 62208.5 |
| hypothetical protein | DU508_07435 | Not Available | Positive | 1754906 - 1755100 | 7463.44 |
| hypothetical protein | DU508_07440 | Not Available | Positive | 1755267 - 1756454 | 42442.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DU508_07445 | Not Available | Positive | 1756537 - 1757016 | 17299.1 |
| duf1440 domain-containing protein | DU508_07450 | Not Available | Negative | 1757013 - 1757483 | 17265.1 |
| pirin family protein | DU508_07455 | Not Available | Negative | 1757770 - 1758639 | 32369.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

