Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase family protein | DU508_07260 | Not Available | Positive | 1721994 - 1722524 | 18721.9 |
| biopolymer transporter exbd | DU508_07265 | Not Available | Positive | 1722626 - 1723156 | 19516.7 |
| methionine adenosyltransferase | DU508_07270 | Not Available | Negative | 1723415 - 1724665 | 46064.6 |
| diacylglycerol kinase family lipid kinase | DU508_07275 | Not Available | Positive | 1724878 - 1725771 | 32695.9 |
| translation initiation factor | DU508_07280 | Not Available | Positive | 1725907 - 1726257 | 12639.4 |
| phosphoenolpyruvate carboxykinase (atp) | DU508_07285 | Not Available | Positive | 1726482 - 1728077 | 59085.5 |
| mota/tolq/exbb proton channel family protein | DU508_07290 | Not Available | Positive | 1728376 - 1729206 | 29060.5 |
| biopolymer transporter exbd | DU508_07295 | Not Available | Positive | 1729284 - 1729898 | 22556.5 |
| biopolymer transporter exbd | DU508_07300 | Not Available | Positive | 1729902 - 1730408 | 18656.6 |
| energy transducer tonb | DU508_07305 | Not Available | Positive | 1730427 - 1731248 | 30119.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

