Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DU508_07210 | Not Available | Positive | 1713138 - 1714751 | 62473.9 |
| Trna-asp | Not Available | Not Available | Positive | 1715057 - 1715130 | Not Available |
| lysr family transcriptional regulator | DU508_07220 | Not Available | Negative | 1715169 - 1716071 | 34315.7 |
| flavodoxin family protein | DU508_07225 | Not Available | Positive | 1716170 - 1716799 | 24131.5 |
| antibiotic biosynthesis monooxygenase | DU508_07230 | Not Available | Positive | 1716771 - 1717055 | 10970.1 |
| dmt family transporter | DU508_07235 | Not Available | Negative | 1717057 - 1717908 | 29641.7 |
| dna-binding response regulator | DU508_07240 | Not Available | Negative | 1717958 - 1718653 | 26300.0 |
| sensor histidine kinase | DU508_07245 | Not Available | Negative | 1718641 - 1720152 | 57879.3 |
| duf3738 domain-containing protein | DU508_07250 | Not Available | Positive | 1720269 - 1721474 | 45085.6 |
| hypothetical protein | DU508_07255 | Not Available | Negative | 1721524 - 1721871 | 13216.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

