Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | DU508_07160 | Not Available | Negative | 1699465 - 1701591 | 79657.5 |
| udp-2,3-diacylglucosamine diphosphatase | DU508_07165 | Not Available | Positive | 1701747 - 1702490 | 28683.4 |
| peptide chain release factor 1 | DU508_07170 | Not Available | Positive | 1703039 - 1704112 | 40182.9 |
| Trna-asp | Not Available | Not Available | Positive | 1704216 - 1704289 | Not Available |
| class a beta-lactamase-related serine hydrolase | DU508_07180 | Not Available | Negative | 1704772 - 1706103 | 49867.8 |
| hypothetical protein | DU508_07185 | Not Available | Positive | 1706517 - 1707014 | 19064.3 |
| hypothetical protein | DU508_07190 | Not Available | Positive | 1707038 - 1707337 | 11205.8 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_07195 | Not Available | Negative | 1707647 - 1709377 | 65994.4 |
| susc/raga family tonb-linked outer membrane protein | DU508_07200 | Not Available | Negative | 1709389 - 1712376 | 108812.0 |
| hypothetical protein | DU508_07205 | Not Available | Negative | 1712814 - 1713011 | 7962.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

