Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | DU508_07110 | Not Available | Positive | 1683506 - 1686127 | 94160.2 |
| port family protein | DU508_07115 | Not Available | Negative | 1686242 - 1686844 | 21602.7 |
| hypothetical protein | DU508_07120 | Not Available | Positive | 1687019 - 1687234 | 8369.12 |
| s41 family peptidase | DU508_07125 | Not Available | Positive | 1687382 - 1689073 | 62602.3 |
| alpha-l-fucosidase | DU508_07130 | Not Available | Positive | 1689225 - 1690550 | 50833.6 |
| glycoside hydrolase family 92 protein | DU508_07135 | Not Available | Positive | 1690633 - 1692888 | 84050.2 |
| glycosyl hydrolase | DU508_07140 | Not Available | Positive | 1693298 - 1695901 | 98965.9 |
| (2fe-2s)-binding protein | DU508_07145 | Not Available | Negative | 1697184 - 1697510 | 11845.2 |
| nad(p)/fad-dependent oxidoreductase | DU508_07150 | Not Available | Negative | 1697577 - 1698587 | 36813.5 |
| hypothetical protein | DU508_07155 | Not Available | Negative | 1698746 - 1699504 | 28807.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

