Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | DU508_07060 | Not Available | Negative | 1663290 - 1665218 | 72118.5 |
| glucosamine-6-phosphate deaminase | DU508_07065 | Not Available | Negative | 1666353 - 1668278 | 72590.5 |
| anhydro-n-acetylmuramic acid kinase | DU508_07070 | Not Available | Positive | 1668428 - 1669624 | 43669.2 |
| tonb-dependent receptor | DU508_07075 | Not Available | Negative | 1669632 - 1672325 | 100690.0 |
| susc/raga family tonb-linked outer membrane protein | DU508_07080 | Not Available | Positive | 1672499 - 1675621 | 113135.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_07085 | Not Available | Positive | 1675638 - 1676933 | 46234.0 |
| deor/glpr transcriptional regulator | DU508_07090 | Not Available | Negative | 1676971 - 1677717 | 27434.5 |
| susc/raga family tonb-linked outer membrane protein | DU508_07095 | Not Available | Positive | 1677959 - 1681039 | 111609.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_07100 | Not Available | Positive | 1681051 - 1682598 | 56825.9 |
| duf4397 domain-containing protein | DU508_07105 | Not Available | Positive | 1682617 - 1683426 | 28765.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

