Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DU508_07010 | Not Available | Positive | 1646198 - 1646938 | 26229.9 |
| 1,4-beta-xylanase | DU508_07015 | Not Available | Positive | 1647386 - 1648510 | 43970.5 |
| glycosyl hydrolase | DU508_07020 | Not Available | Positive | 1648516 - 1651383 | 107783.0 |
| alpha-n-arabinofuranosidase | DU508_07025 | Not Available | Positive | 1651413 - 1652510 | 40835.8 |
| duf5009 domain-containing protein | DU508_07030 | Not Available | Positive | 1653003 - 1654163 | 42848.5 |
| laci family transcriptional regulator | DU508_07035 | Not Available | Positive | 1654218 - 1655237 | 37344.2 |
| mannonate dehydratase | DU508_07040 | Not Available | Negative | 1655242 - 1656411 | 43840.0 |
| tonb-dependent receptor | DU508_07045 | Not Available | Positive | 1656662 - 1659775 | 112832.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_07050 | Not Available | Positive | 1659788 - 1661602 | 67421.2 |
| hypothetical protein | DU508_07055 | Not Available | Positive | 1661624 - 1663246 | 58436.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

