Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DU508_00645 | Not Available | Positive | 137434 - 139002 | 57393.6 |
| dihydrodipicolinate synthase family protein | DU508_00650 | Not Available | Positive | 139063 - 139995 | 34700.6 |
| arac family transcriptional regulator | DU508_00655 | Not Available | Negative | 140132 - 141001 | 33781.0 |
| fucose isomerase | DU508_00660 | Not Available | Positive | 141231 - 142868 | 61222.3 |
| duf3826 domain-containing protein | DU508_00665 | Not Available | Positive | 142883 - 143551 | 25609.7 |
| susc/raga family tonb-linked outer membrane protein | DU508_00670 | Not Available | Positive | 144037 - 147198 | 116753.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_00675 | Not Available | Positive | 147209 - 149065 | 69013.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 148861 - 148972 | Not Available |
| hypothetical protein | DU508_00680 | Not Available | Positive | 149113 - 150081 | 35693.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 149160 - 149271 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

