Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DU508_06860 | Not Available | Negative | 1610617 - 1611033 | 15804.8 |
| pglz domain-containing protein | DU508_06865 | Not Available | Negative | 1611903 - 1613456 | 60491.3 |
| hd domain-containing protein | DU508_06870 | Not Available | Positive | 1613691 - 1614791 | 41803.5 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DU508_06875 | Not Available | Positive | 1614914 - 1615990 | 38617.7 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DU508_06880 | Not Available | Positive | 1615980 - 1617392 | 52258.3 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DU508_06885 | Not Available | Positive | 1617392 - 1618177 | 28560.5 |
| n-acetyltransferase | DU508_06890 | Not Available | Positive | 1618251 - 1618718 | 17540.9 |
| abc transporter atp-binding protein | DU508_06895 | Not Available | Positive | 1618726 - 1619340 | 22943.4 |
| elongation factor p | DU508_06900 | Not Available | Positive | 1620207 - 1620767 | 21294.2 |
| elongation factor p | DU508_06905 | Not Available | Positive | 1620887 - 1621447 | 20903.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

