Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DU508_06760 | Not Available | Positive | 1587560 - 1588141 | 22556.1 |
| hypothetical protein | DU508_06765 | Not Available | Positive | 1588138 - 1588620 | 18509.4 |
| serine hydrolase family protein | DU508_06770 | Not Available | Negative | 1588682 - 1589035 | 12949.3 |
| hypothetical protein | DU508_06775 | Not Available | Negative | 1589005 - 1589121 | 4583.32 |
| cold-shock protein | DU508_06780 | Not Available | Negative | 1589320 - 1589511 | 6928.29 |
| hypothetical protein | DU508_06785 | Not Available | Negative | 1589616 - 1590542 | 35549.1 |
| phosphodiester glycosidase family protein | DU508_06790 | Not Available | Negative | 1590557 - 1591423 | 32182.6 |
| duf5117 domain-containing protein | DU508_06795 | Not Available | Negative | 1591596 - 1594109 | 93827.8 |
| pdz domain-containing protein | DU508_06800 | Not Available | Negative | 1594203 - 1595450 | 47050.5 |
| peptidase s13 | DU508_06805 | Not Available | Positive | 1595503 - 1596831 | 50459.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

