Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_06710 | Not Available | Negative | 1579617 - 1580423 | 30727.1 |
| hypothetical protein | DU508_06715 | Not Available | Negative | 1580538 - 1581305 | 29420.3 |
| hypothetical protein | DU508_06720 | Not Available | Negative | 1581289 - 1581681 | 14371.4 |
| hypothetical protein | DU508_06725 | Not Available | Negative | 1581678 - 1582280 | 22403.2 |
| glutamate--trna ligase | DU508_06730 | Not Available | Negative | 1582457 - 1583965 | 56685.8 |
| sensor histidine kinase | DU508_06735 | Not Available | Positive | 1584158 - 1585363 | 46387.0 |
| dinb family protein | DU508_06740 | Not Available | Positive | 1585344 - 1585853 | 20054.8 |
| hotdog fold thioesterase | DU508_06745 | Not Available | Positive | 1585843 - 1586265 | 15381.7 |
| hypothetical protein | DU508_06750 | Not Available | Negative | 1586317 - 1586685 | 13251.7 |
| qace family quaternary ammonium compound efflux smr transporter | DU508_06755 | Not Available | Positive | 1586967 - 1587287 | 11603.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

