Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | DU508_06660 | Not Available | Positive | 1568615 - 1569172 | 20709.0 |
| duf3137 domain-containing protein | DU508_06665 | Not Available | Positive | 1569172 - 1570128 | 36205.9 |
| response regulator | DU508_06670 | Not Available | Negative | 1570413 - 1570778 | 13496.9 |
| chemotaxis protein cheb | DU508_06675 | Not Available | Negative | 1570802 - 1571386 | 21329.7 |
| protein-glutamate o-methyltransferase cher | DU508_06680 | Not Available | Negative | 1571371 - 1572189 | 31872.2 |
| response regulator | DU508_06685 | Not Available | Negative | 1572186 - 1572563 | 13657.8 |
| response regulator | DU508_06690 | Not Available | Negative | 1572579 - 1576157 | 133838.0 |
| hybrid sensor histidine kinase/response regulator | DU508_06695 | Not Available | Negative | 1576176 - 1577309 | 42749.7 |
| metalloprotease | DU508_06700 | Not Available | Negative | 1577413 - 1578255 | 30790.1 |
| hypothetical protein | DU508_06705 | Not Available | Negative | 1578959 - 1579396 | 16770.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

