Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | DU508_06610 | Not Available | Positive | 1556258 - 1557685 | 51348.7 |
| aec family transporter | DU508_06615 | Not Available | Negative | 1558416 - 1559327 | 33355.4 |
| atp-dependent helicase | DU508_06620 | Not Available | Negative | 1559392 - 1560624 | 46130.1 |
| sigma-70 family rna polymerase sigma factor | DU508_06625 | Not Available | Positive | 1560793 - 1561371 | 22565.2 |
| hypothetical protein | DU508_06630 | Not Available | Positive | 1561364 - 1562647 | 46683.0 |
| hypothetical protein | DU508_06635 | Not Available | Negative | 1562649 - 1562867 | 7956.94 |
| inorganic phosphate transporter | DU508_06640 | Not Available | Negative | 1562929 - 1563939 | 35675.3 |
| duf47 domain-containing protein | DU508_06645 | Not Available | Negative | 1563952 - 1564599 | 24615.5 |
| hypothetical protein | DU508_06650 | Not Available | Positive | 1564873 - 1566660 | 67263.7 |
| hypothetical protein | DU508_06655 | Not Available | Positive | 1566722 - 1568560 | 71120.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

