Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | DU508_06560 | Not Available | Positive | 1540654 - 1541103 | 17165.2 |
| duf4197 domain-containing protein | DU508_06565 | Not Available | Positive | 1541288 - 1542046 | 27384.3 |
| hypothetical protein | DU508_06570 | Not Available | Positive | 1542128 - 1543063 | 33875.9 |
| 2-dehydropantoate 2-reductase | DU508_06575 | Not Available | Positive | 1543121 - 1544047 | 33591.2 |
| phosphatase pap2 family protein | DU508_06580 | Not Available | Positive | 1544290 - 1545666 | 50976.8 |
| co-chaperone groes | DU508_06585 | Not Available | Positive | 1546229 - 1546519 | 10216.1 |
| chaperonin groel | DU508_06590 | Not Available | Positive | 1546620 - 1548257 | 57607.2 |
| pkd domain-containing protein | DU508_06595 | Not Available | Positive | 1548568 - 1554495 | 207597.0 |
| type ix secretion system membrane protein porp/sprf | DU508_06600 | Not Available | Positive | 1554492 - 1555514 | 37636.4 |
| mgtc/sapb family protein | DU508_06605 | Not Available | Positive | 1555538 - 1556197 | 24321.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

