Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_06460 | Not Available | Negative | 1525205 - 1525432 | 8665.49 |
| exodeoxyribonuclease iii | DU508_06465 | Not Available | Positive | 1525523 - 1526290 | 29412.1 |
| imidazolonepropionase | DU508_06470 | Not Available | Positive | 1526382 - 1527629 | 45192.4 |
| arginase | DU508_06475 | Not Available | Positive | 1527616 - 1528608 | 36288.3 |
| 5-formyltetrahydrofolate cyclo-ligase | DU508_06480 | Not Available | Negative | 1528810 - 1529370 | 21577.1 |
| hypothetical protein | DU508_06485 | Not Available | Positive | 1529631 - 1530152 | 20116.8 |
| putative dna modification/repair radical sam protein | DU508_06490 | Not Available | Positive | 1530243 - 1531502 | 47877.1 |
| dna metabolism protein | DU508_06495 | Not Available | Positive | 1531499 - 1532266 | 30056.1 |
| sensor histidine kinase | DU508_06500 | Not Available | Positive | 1532301 - 1533326 | 39279.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DU508_06505 | Not Available | Positive | 1533478 - 1534893 | 53075.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

