Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain-containing protein | DU508_06410 | Not Available | Positive | 1518030 - 1518443 | 16016.6 |
| heavy-metal-associated domain-containing protein | DU508_06415 | Not Available | Negative | 1518444 - 1519163 | 26516.9 |
| 4,5-dopa dioxygenase extradiol | DU508_06420 | Not Available | Negative | 1520174 - 1520998 | 30641.7 |
| arac family transcriptional regulator | DU508_06425 | Not Available | Negative | 1521099 - 1521659 | 21031.5 |
| duf3347 domain-containing protein | DU508_06430 | Not Available | Negative | 1521659 - 1522162 | 18795.0 |
| hypothetical protein | DU508_06435 | Not Available | Negative | 1522252 - 1523064 | 30319.5 |
| heavy-metal-associated domain-containing protein | DU508_06440 | Not Available | Negative | 1523066 - 1523602 | 19327.4 |
| hypothetical protein | DU508_06445 | Not Available | Negative | 1523710 - 1524114 | 15005.7 |
| peptidylprolyl isomerase | DU508_06450 | Not Available | Positive | 1524209 - 1524931 | 27411.3 |
| type ii toxin-antitoxin system rele/pare family toxin | DU508_06455 | Not Available | Negative | 1524924 - 1525214 | 11562.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

