Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DU508_06360 | Not Available | Positive | 1505127 - 1506674 | 56097.6 |
| phosphoenolpyruvate carboxylase | DU508_06365 | Not Available | Positive | 1506937 - 1509522 | 98193.7 |
| hypothetical protein | DU508_06370 | Not Available | Negative | 1510012 - 1510260 | 8994.81 |
| thioredoxin | DU508_06375 | Not Available | Negative | 1510260 - 1510568 | 11560.9 |
| peroxiredoxin | DU508_06380 | Not Available | Negative | 1510583 - 1511215 | 23470.5 |
| s9 family peptidase | DU508_06385 | Not Available | Negative | 1511811 - 1514087 | 85818.8 |
| hypothetical protein | DU508_06390 | Not Available | Negative | 1514384 - 1515574 | 44264.5 |
| aldehyde dehydrogenase family protein | DU508_06395 | Not Available | Positive | 1515734 - 1517125 | 51736.9 |
| putative metal-dependent hydrolase | DU508_06400 | Not Available | Positive | 1517222 - 1517743 | 20331.3 |
| hypothetical protein | DU508_06405 | Not Available | Positive | 1517794 - 1518033 | 8886.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

