Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DU508_06310 | Not Available | Positive | 1492121 - 1492987 | 33602.2 |
| tonb-dependent receptor | DU508_06315 | Not Available | Positive | 1493284 - 1496385 | 113898.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_06320 | Not Available | Positive | 1496396 - 1497853 | 53943.7 |
| hypothetical protein | DU508_06325 | Not Available | Positive | 1498010 - 1498468 | 17212.8 |
| duf2911 domain-containing protein | DU508_06330 | Not Available | Negative | 1498538 - 1499107 | 21345.9 |
| hypothetical protein | DU508_06335 | Not Available | Negative | 1499245 - 1499430 | 6686.24 |
| cellulase | DU508_06340 | Not Available | Negative | 1499503 - 1502013 | 95367.4 |
| tetr/acrr family transcriptional regulator | DU508_06345 | Not Available | Positive | 1502129 - 1502755 | 23695.0 |
| tolc family protein | DU508_06350 | Not Available | Positive | 1502752 - 1504071 | 48545.3 |
| hlyd family secretion protein | DU508_06355 | Not Available | Positive | 1504080 - 1505117 | 37132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

