Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DU508_06260 | Not Available | Negative | 1473279 - 1475141 | 69110.0 |
| abc transporter atp-binding protein | DU508_06265 | Not Available | Negative | 1475276 - 1477138 | 70754.1 |
| hypothetical protein | DU508_06270 | Not Available | Negative | 1477420 - 1478052 | 22543.5 |
| rrna maturation rnase ybey | DU508_06275 | Not Available | Negative | 1478554 - 1478991 | 17078.4 |
| hypothetical protein | DU508_06280 | Not Available | Negative | 1479789 - 1483106 | 127078.0 |
| licheninase | DU508_06285 | Not Available | Positive | 1483459 - 1484964 | 57080.3 |
| phospholipase c, phosphocholine-specific | DU508_06290 | Not Available | Positive | 1485547 - 1487916 | 88665.2 |
| hypothetical protein | DU508_06295 | Not Available | Positive | 1487976 - 1490891 | 110239.0 |
| dna-binding response regulator | DU508_06300 | Not Available | Positive | 1490926 - 1491552 | 23152.0 |
| hypothetical protein | DU508_06305 | Not Available | Positive | 1491744 - 1492109 | 13861.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

