Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | DU508_06210 | Not Available | Positive | 1460432 - 1461571 | 42289.2 |
| hypothetical protein | DU508_06215 | Not Available | Negative | 1461568 - 1462413 | 32819.3 |
| formyltetrahydrofolate deformylase | DU508_06220 | Not Available | Negative | 1462432 - 1463271 | 31704.5 |
| dna recombination protein rmuc | DU508_06225 | Not Available | Positive | 1463600 - 1464970 | 51976.1 |
| thiamine-phosphate kinase | DU508_06230 | Not Available | Negative | 1465260 - 1466300 | 38117.6 |
| dicarboxylate/amino acid:cation symporter | DU508_06235 | Not Available | Negative | 1466449 - 1467684 | 43939.1 |
| quinolinate synthase nada | DU508_06240 | Not Available | Negative | 1467769 - 1468767 | 37030.9 |
| l-aspartate oxidase | DU508_06245 | Not Available | Positive | 1469216 - 1470802 | 59662.1 |
| gamma carbonic anhydrase family protein | DU508_06250 | Not Available | Positive | 1470931 - 1471452 | 18695.5 |
| hypothetical protein | DU508_06255 | Not Available | Negative | 1471513 - 1473156 | 62029.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

