Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | DU508_06160 | Not Available | Negative | 1448761 - 1451454 | 100203.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DU508_06165 | Not Available | Positive | 1452058 - 1454391 | 88907.5 |
| acyl-coa thioesterase | DU508_06170 | Not Available | Positive | 1454492 - 1454878 | 14484.6 |
| class i sam-dependent methyltransferase | DU508_06175 | Not Available | Positive | 1454942 - 1455619 | 25561.6 |
| phosphatidate cytidylyltransferase | DU508_06180 | Not Available | Negative | 1455798 - 1456607 | 30513.9 |
| duf2007 domain-containing protein | DU508_06185 | Not Available | Negative | 1456648 - 1456866 | 8031.51 |
| cpbp family intramembrane metalloprotease | DU508_06190 | Not Available | Negative | 1456835 - 1457761 | 35122.2 |
| trna dihydrouridine synthase dusb | DU508_06195 | Not Available | Positive | 1457806 - 1458813 | 38004.8 |
| co2+/mg2+ efflux protein apag | DU508_06200 | Not Available | Positive | 1458850 - 1459236 | 14710.5 |
| hypothetical protein | DU508_06205 | Not Available | Negative | 1459651 - 1460346 | 25624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

