Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | DU508_06110 | Not Available | Positive | 1436910 - 1437989 | 39372.5 |
| tetratricopeptide repeat protein | DU508_06115 | Not Available | Negative | 1437986 - 1439473 | 56101.9 |
| hypothetical protein | DU508_06120 | Not Available | Negative | 1439634 - 1440377 | 28319.9 |
| nif3-like dinuclear metal center hexameric protein | DU508_06125 | Not Available | Negative | 1440377 - 1441474 | 40958.3 |
| tm2 domain-containing protein | DU508_06130 | Not Available | Negative | 1441962 - 1442330 | 13692.1 |
| duf2752 domain-containing protein | DU508_06135 | Not Available | Negative | 1442336 - 1442638 | 11396.9 |
| transcription-repair coupling factor | DU508_06140 | Not Available | Positive | 1442823 - 1446161 | 126389.0 |
| atp-binding protein | DU508_06145 | Not Available | Positive | 1446250 - 1447386 | 43664.8 |
| hypothetical protein | DU508_06150 | Not Available | Positive | 1447386 - 1447607 | 8580.76 |
| dsba family oxidoreductase | DU508_06155 | Not Available | Negative | 1447946 - 1448662 | 27262.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

