Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | DU508_06010 | Not Available | Negative | 1417927 - 1418274 | 13035.8 |
| hypothetical protein | DU508_06015 | Not Available | Negative | 1418412 - 1418603 | 7370.04 |
| hypothetical protein | DU508_06020 | Not Available | Negative | 1418634 - 1420415 | 68938.0 |
| dna-binding response regulator | DU508_06025 | Not Available | Negative | 1420393 - 1421025 | 24311.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DU508_06030 | Not Available | Negative | 1421088 - 1421762 | 25016.9 |
| hypothetical protein | DU508_06035 | Not Available | Negative | 1421825 - 1422445 | 23820.4 |
| 16s rrna processing protein rimm | DU508_06040 | Not Available | Negative | 1422488 - 1423015 | 20347.1 |
| 30s ribosomal protein s16 | DU508_06045 | Not Available | Negative | 1423201 - 1423773 | 20369.9 |
| 5'(3')-deoxyribonucleotidase | DU508_06050 | Not Available | Positive | 1423938 - 1424438 | 19607.4 |
| duf2135 domain-containing protein | DU508_06055 | Not Available | Negative | 1424630 - 1427716 | 115513.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

