Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_05960 | Not Available | Positive | 1408514 - 1408966 | 16833.8 |
| insulinase family protein | DU508_05965 | Not Available | Positive | 1408993 - 1410225 | 46210.2 |
| peptide deformylase | DU508_05970 | Not Available | Positive | 1410328 - 1410888 | 21211.7 |
| hypothetical protein | DU508_05975 | Not Available | Negative | 1410950 - 1411588 | 24148.2 |
| nifu family protein | DU508_05980 | Not Available | Negative | 1411641 - 1411886 | 8694.55 |
| iron-sulfur cluster carrier protein apbc | DU508_05985 | Not Available | Negative | 1411921 - 1412997 | 38358.4 |
| penicillin-binding protein | DU508_05990 | Not Available | Positive | 1413129 - 1415276 | 80389.3 |
| hypoxanthine phosphoribosyltransferase | DU508_05995 | Not Available | Positive | 1415353 - 1415895 | 20162.5 |
| phosphatidylserine decarboxylase family protein | DU508_06000 | Not Available | Positive | 1415951 - 1416610 | 24902.2 |
| mechanosensitive ion channel family protein | DU508_06005 | Not Available | Negative | 1416683 - 1417855 | 43921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

