Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DU508_05910 | Not Available | Positive | 1397627 - 1398682 | 39274.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DU508_05915 | Not Available | Positive | 1398678 - 1399337 | 23960.4 |
| mfs transporter | DU508_05920 | Not Available | Positive | 1399359 - 1400798 | 53440.8 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | DU508_05925 | Not Available | Positive | 1400913 - 1402538 | 60506.9 |
| hypothetical protein | DU508_05930 | Not Available | Positive | 1403057 - 1403431 | 13395.9 |
| hypothetical protein | DU508_05935 | Not Available | Negative | 1403477 - 1403725 | 9614.96 |
| hypothetical protein | DU508_05940 | Not Available | Positive | 1403896 - 1404243 | 13597.1 |
| mbl fold metallo-hydrolase | DU508_05945 | Not Available | Positive | 1404324 - 1405706 | 51709.3 |
| glutamate-5-semialdehyde dehydrogenase | DU508_05950 | Not Available | Negative | 1405811 - 1407058 | 45476.7 |
| glutamate 5-kinase | DU508_05955 | Not Available | Negative | 1407184 - 1408263 | 39189.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

