Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DU508_05810 | Not Available | Negative | 1369148 - 1369891 | 27697.5 |
| phosphosulfolactate synthase | DU508_05815 | Not Available | Negative | 1369992 - 1370759 | 28656.5 |
| tetratricopeptide repeat protein | DU508_05820 | Not Available | Negative | 1370820 - 1372223 | 54821.0 |
| hypothetical protein | DU508_05825 | Not Available | Positive | 1372474 - 1372929 | 17206.8 |
| m1 family peptidase | DU508_05830 | Not Available | Negative | 1373163 - 1375673 | 94076.9 |
| aldehyde dehydrogenase family protein | DU508_05835 | Not Available | Positive | 1375797 - 1377338 | 55111.1 |
| hypothetical protein | DU508_05840 | Not Available | Positive | 1377666 - 1378118 | 17891.4 |
| hypothetical protein | DU508_05845 | Not Available | Negative | 1378168 - 1378809 | 22845.3 |
| tonb-dependent receptor | DU508_05850 | Not Available | Positive | 1379232 - 1381898 | 99531.8 |
| glpgli family protein | DU508_05855 | Not Available | Positive | 1381904 - 1382686 | 29669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

