Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | DU508_05760 | Not Available | Negative | 1359650 - 1360117 | 17437.1 |
| pp_01138 | DU508_05765 | Not Available | Negative | 1360229 - 1360564 | Not Available |
| carbohydrate kinase | DU508_05770 | Not Available | Positive | 1360815 - 1362293 | 54057.4 |
| xylose isomerase | DU508_05775 | Not Available | Positive | 1362313 - 1363644 | 49959.4 |
| sodium transporter | DU508_05780 | Not Available | Positive | 1363777 - 1365453 | 60503.4 |
| voc family protein | DU508_05785 | Not Available | Positive | 1365723 - 1366100 | 14015.5 |
| hypothetical protein | DU508_05790 | Not Available | Negative | 1366102 - 1366485 | 14115.0 |
| abc transporter permease | DU508_05795 | Not Available | Negative | 1366487 - 1367680 | 43746.5 |
| mbl fold metallo-hydrolase | DU508_05800 | Not Available | Negative | 1367803 - 1368441 | 23777.4 |
| gliding motility lipoprotein gldd | DU508_05805 | Not Available | Negative | 1368502 - 1369089 | 23284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

