Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DU508_05710 | Not Available | Negative | 1348469 - 1350265 | 66533.0 |
| tonb-dependent receptor | DU508_05715 | Not Available | Negative | 1350287 - 1353475 | 117185.0 |
| laci family transcriptional regulator | DU508_05720 | Not Available | Positive | 1353744 - 1354778 | 38711.7 |
| class i sam-dependent rrna methyltransferase | DU508_05725 | Not Available | Positive | 1354839 - 1356023 | 43818.4 |
| gnat family n-acetyltransferase | DU508_05730 | Not Available | Negative | 1356219 - 1356713 | 18942.9 |
| thiamine pyrophosphokinase | DU508_05735 | Not Available | Negative | 1356710 - 1357270 | 20961.9 |
| thiamine phosphate synthase | DU508_05740 | Not Available | Negative | 1357322 - 1357954 | 23319.8 |
| hypothetical protein | DU508_05745 | Not Available | Negative | 1358056 - 1358286 | 8698.93 |
| hypothetical protein | DU508_05750 | Not Available | Negative | 1358295 - 1358756 | 17608.2 |
| superoxide dismutase | DU508_05755 | Not Available | Negative | 1358857 - 1359465 | 22336.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

