Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_05660 | Not Available | Positive | 1335413 - 1335691 | 11396.1 |
| duf3078 domain-containing protein | DU508_05665 | Not Available | Positive | 1335784 - 1336785 | 38087.6 |
| hypothetical protein | DU508_05670 | Not Available | Negative | 1336786 - 1337514 | 27931.4 |
| arac family transcriptional regulator | DU508_05675 | Not Available | Positive | 1337610 - 1338599 | 37525.9 |
| hypothetical protein | DU508_05680 | Not Available | Negative | 1338915 - 1341338 | 93207.1 |
| signal recognition particle protein | DU508_05685 | Not Available | Positive | 1341531 - 1342871 | 48842.7 |
| atp-binding protein | DU508_05690 | Not Available | Positive | 1343365 - 1344903 | 56101.9 |
| gntr family transcriptional regulator | DU508_05695 | Not Available | Negative | 1345066 - 1345803 | 27247.1 |
| pectin esterase | DU508_05700 | Not Available | Negative | 1345806 - 1346825 | 37858.2 |
| duf4957 domain-containing protein | DU508_05705 | Not Available | Negative | 1346907 - 1348469 | 54982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

